CDSFormatConverter
We provide tools that convert the CDS format of a gene finder to the format
that is acceptable for MetaTISA.
MeteGeneAnnotator 2 MED: mga2med (windows version )
Download source code here (tarball)
Table of Contents
Linux Release of MetaTISA
The package in MetaTISA contains the following items:
- Source code of MetaTISA
- Default settings file of MetaTISA
- Pre-calculated TIS parameters in folder "parameter" (in case for groups whose samples
are insufficient for a good self-training of paramters)
- k-mer bin model file and taxonomic map file in folder " bin_model"
- Example file in folder "example"
- Readme file
-
MetaTISA (tarball)
Table of Contents
Windows Release of MetaTISA
The package in MetaTISA contains the following items:
- Executable file of MetaTISA
- Default settings file of MetaTISA
- Pre-calculated TIS parameters in folder "parameter" (in case for groups whose samples
are insufficient for a good self-training of paramters)
- k-mer bin model file and taxonomic map file in folder " bin_model"
- Example file in folder "example"
- Readme file
- MetaTISA(zip)
- Download source code of windows here (zip)
Table of Contents
Visualization of PWM
The package in PWM visualization contains the following items:
- Matlab script to visualize PWM around TIS
- Visualization of pre-calculated PWM
- Readme file
- PWM Visulization(tarball)
Table of Contents
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